Alexandre Gramfort
117 lines
5.1 KiB
Python
117 lines
5.1 KiB
Python
"""MNE software for MEG and EEG data analysis."""
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# PEP0440 compatible formatted version, see:
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# https://www.python.org/dev/peps/pep-0440/
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#
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# Generic release markers:
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# X.Y
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# X.Y.Z # For bugfix releases
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#
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# Admissible pre-release markers:
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# X.YaN # Alpha release
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# X.YbN # Beta release
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# X.YrcN # Release Candidate
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# X.Y # Final release
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#
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# Dev branch marker is: 'X.Y.devN' where N is an integer.
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#
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__version__ = '0.17.dev0'
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# have to import verbose first since it's needed by many things
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from .utils import (set_log_level, set_log_file, verbose, set_config,
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get_config, get_config_path, set_cache_dir,
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set_memmap_min_size, grand_average, sys_info, open_docs)
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from .io.pick import (pick_types, pick_channels,
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pick_channels_regexp, pick_channels_forward,
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pick_types_forward, pick_channels_cov,
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pick_channels_evoked, pick_info)
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from .io.base import concatenate_raws
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from .io.meas_info import create_info, Info
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from .io.proj import Projection
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from .io.kit import read_epochs_kit
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from .io.eeglab import read_epochs_eeglab
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from .io.reference import (set_eeg_reference, set_bipolar_reference,
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add_reference_channels)
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from .bem import (make_sphere_model, make_bem_model, make_bem_solution,
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read_bem_surfaces, write_bem_surfaces,
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read_bem_solution, write_bem_solution)
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from .cov import (read_cov, write_cov, Covariance, compute_raw_covariance,
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compute_covariance, whiten_evoked, make_ad_hoc_cov)
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from .event import (read_events, write_events, find_events, merge_events,
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pick_events, make_fixed_length_events, concatenate_events,
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find_stim_steps, AcqParserFIF)
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from .forward import (read_forward_solution, apply_forward, apply_forward_raw,
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average_forward_solutions, Forward,
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write_forward_solution, make_forward_solution,
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convert_forward_solution, make_field_map,
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make_forward_dipole)
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from .source_estimate import (read_source_estimate, MixedSourceEstimate,
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SourceEstimate, VectorSourceEstimate,
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VolSourceEstimate, morph_data,
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morph_data_precomputed, compute_morph_matrix,
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grade_to_tris, grade_to_vertices,
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spatial_src_connectivity,
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spatial_tris_connectivity,
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spatial_dist_connectivity,
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spatial_inter_hemi_connectivity,
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spatio_temporal_src_connectivity,
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spatio_temporal_tris_connectivity,
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spatio_temporal_dist_connectivity,
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save_stc_as_volume, extract_label_time_course)
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from .surface import (read_surface, write_surface, decimate_surface, read_tri,
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read_morph_map, get_head_surf, get_meg_helmet_surf)
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from .source_space import (read_source_spaces, vertex_to_mni,
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head_to_mni,
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write_source_spaces, setup_source_space,
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setup_volume_source_space, SourceSpaces,
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add_source_space_distances, morph_source_spaces,
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get_volume_labels_from_aseg,
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get_volume_labels_from_src)
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from .annotations import Annotations, read_annotations
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from .epochs import (BaseEpochs, Epochs, EpochsArray, read_epochs,
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concatenate_epochs)
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from .evoked import Evoked, EvokedArray, read_evokeds, write_evokeds, combine_evoked
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from .label import (read_label, label_sign_flip,
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write_label, stc_to_label, grow_labels, Label, split_label,
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BiHemiLabel, read_labels_from_annot, write_labels_to_annot, random_parcellation)
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from .misc import parse_config, read_reject_parameters
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from .coreg import (create_default_subject, scale_bem, scale_mri, scale_labels,
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scale_source_space)
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from .transforms import (read_trans, write_trans,
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transform_surface_to, Transform)
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from .proj import (read_proj, write_proj, compute_proj_epochs,
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compute_proj_evoked, compute_proj_raw, sensitivity_map)
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from .selection import read_selection
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from .dipole import read_dipole, Dipole, DipoleFixed, fit_dipole
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from .channels import equalize_channels, rename_channels, find_layout
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from .report import Report
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from . import beamformer
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from . import channels
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from . import chpi
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from . import commands
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from . import connectivity
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from . import coreg
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from . import cuda
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from . import datasets
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from . import dipole
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from . import epochs
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from . import event
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from . import externals
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from . import io
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from . import filter
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from . import gui
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from . import minimum_norm
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from . import preprocessing
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from . import simulation
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from . import stats
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from . import time_frequency
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from . import viz
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from . import decoding
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from . import realtime
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# initialize logging
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set_log_level(None, False)
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set_log_file()
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